Crystallin
In anatomy, a crystallin is a water-soluble structural protein found in the lens and the cornea of the eye accounting for the transparency of the structure.[1] It has also been identified in other places such as the heart, and in aggressive breast cancer tumors.[2][3] The physical origins of eye lens transparency and its relationship to cataract are an active area of research. [4] Since it has been shown that lens injury may promote nerve regeneration,[5] crystallin has been an area of neural research. So far, it has been demonstrated that crystallin β b2 (crybb2) may be a neurite-promoting factor.[6]
Function
[edit]The main function of crystallins at least in the lens of the eye is probably to increase the refractive index while not obstructing light. However, this is not their only function. It has become clear that crystallins may have several metabolic and regulatory functions, both within the lens and in other parts of the body.[7] More proteins containing βγ-crystallin domains have now been characterized as calcium binding proteins with Greek key motif as a novel calcium-binding motif.[8]
Enzyme activity
[edit]Some crystallins are active enzymes, while others lack activity but show homology to other enzymes.[9][10] The crystallins of different groups of organisms are related to a large number of different proteins, with those from birds and reptiles related to lactate dehydrogenase and argininosuccinate lyase, those of mammals to alcohol dehydrogenase and quinone reductase, and those of cephalopods to glutathione S-transferase and aldehyde dehydrogenase. Whether these crystallins are products of a fortuitous accident of evolution, in that these particular enzymes happened to be transparent and highly soluble, or whether these diverse enzymatic activities are part of the protective machinery of the lens, is an active research topic.[11] The recruitment of protein that originally evolved with one function to serve a second, unrelated function is an example of an exaptation.[12]
Classification
[edit]Crystallins from a vertebrate eye lens are classified into three main types: alpha, beta and gamma crystallins. These distinctions are based on the order in which they elute from a gel filtration chromatography column. These are also called ubiquitous crystallins. Beta- and gamma-crystallins (such as CRYGC) are similar in sequence, structure and domains topology, and thus have been grouped together as a protein superfamily called βγ-Crystallins. The α-crystallin family and βγ-crystallins compose the major family of proteins present in the crystalline lens. They occur in all vertebrate classes (though gamma-crystallins are low or absent in avian lenses); and delta-crystallin is found exclusively in reptiles and birds.[13][14]
In addition to these crystallins there are other taxon-specific crystallins which are only found in the lens of some organisms; these include delta, epsilon, tau, and iota-crystallins. For example, alpha, beta, and delta crystallins are found in avian and reptilian lenses, and the alpha, beta, and gamma families are found in the lenses of all other vertebrates.
Alpha-crystallin
[edit]| Alpha crystallin A chain, N terminal | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Identifiers | |||||||||
| Symbol | Crystallin | ||||||||
| Pfam | PF00525 | ||||||||
| InterPro | IPR003090 | ||||||||
| |||||||||
Alpha-crystallin occurs as large aggregates, comprising two types of related subunits (A and B) that are highly similar to the small (15-30kDa) heat shock proteins (sHsps), particularly in their C-terminal halves. The relationship between these families is one of classic gene duplication and divergence, from the small HSP family, allowing adaptation to novel functions. Divergence probably occurred prior to evolution of the eye lens, alpha-crystallin being found in small amounts in tissues outside the lens.[13]
Alpha-crystallin has chaperone-like properties including the ability to prevent the precipitation of denatured proteins and to increase cellular tolerance to stress.[15] It has been suggested that these functions are important for the maintenance of lens transparency and the prevention of cataracts.[16] This is supported by the observation that alpha-crystallin mutations show an association with cataract formation.
The N-terminal domain of alpha-crystallin is not necessary for dimerisation or chaperone activity, but appears to be required for the formation of higher order aggregates.[17][18]
Beta and gamma crystallin
[edit]| Beta/Gamma crystallin | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Identifiers | |||||||||
| Symbol | Crystall | ||||||||
| Pfam | PF00030 | ||||||||
| InterPro | IPR001064 | ||||||||
| PROSITE | PDOC00197 | ||||||||
| SCOP2 | 4gcr / SCOPe / SUPFAM | ||||||||
| |||||||||
Beta- and gamma- crystallin form a separate family.[19][20] Structurally, beta and gamma crystallins are composed of two similar domains which, in turn, are each composed of two similar motifs with the two domains connected by a short connecting peptide. Each motif, which is about forty amino acid residues long, is folded in a distinctive Greek key pattern. However, beta crystallin is an oligomer, composed of a complex group of molecules, whereas gamma crystallin is a simpler monomer.[21] [22]
 | This section may require cleanup to meet Wikipedia's quality standards. The specific problem is: Lots of duplicate entries in the table. Please regenerate the table using only the "reviewed" entries. (March 2021) |
| UniProt Entry name | Alternate Gene names | Length |
|---|---|---|
| AIM1L_HUMAN | AIM1L CRYBG2 | 616 |
| AIM1_HUMAN | AIM1 CRYBG1 | 1723 |
| ARLY_HUMAN | ASL | 464 |
| CRBA1_HUMAN | CRYBA1 CRYB1 | 215 |
| CRBA2_HUMAN | CRYBA2 | 197 |
| CRBB1_HUMAN | CRYBB1 | 252 |
| CRBA4_HUMAN | CRYBA4 | 196 |
| CRBB2_HUMAN | CRYBB2 CRYB2 CRYB2A | 205 |
| CRBB3_HUMAN | CRYBB3 CRYB3 | 211 |
| CRBG3_HUMAN | CRYBG3 | 1022 |
| CRBS_HUMAN | CRYGS CRYG8 | 178 |
| CRGA_HUMAN | CRYGA CRYG1 | 174 |
| CRGC_HUMAN | CRYGC CRYG3 | 174 |
| CRGB_HUMAN | CRYGB CRYG2 | 175 |
| CRGN_HUMAN | CRYGN | 182 |
| CRGD_HUMAN | CRYGD CRYG4 | 174 |
| CRYAA_HUMAN | CRYAA CRYA1 HSPB4 | 173 |
| CRYAB_HUMAN | CRYAB CRYA2 | 175 |
| CRYL1_HUMAN | CRYL1 CRY | 319 |
| CRYM_HUMAN | CRYM THBP | 314 |
| HSPB2_HUMAN | HSPB2 | 182 |
| HSPB3_HUMAN | HSPB3 HSP27 HSPL27 | 150 |
| HSPB8_HUMAN | HSPB8 CRYAC E2IG1 HSP22 PP1629 | 196 |
| HSPB7_HUMAN | HSPB7 CVHSP | 170 |
| HSPB9_HUMAN | HSPB9 | 159 |
| HSPB1_HUMAN | HSPB1 HSP27 HSP28 | 205 |
| HSPB6_HUMAN | HSPB6 | 160 |
| IFT25_HUMAN | HSPB11 C1orf41 IFT25 HSPC034 | 144 |
| MAF_HUMAN | MAF | 373 |
| ODFP1_HUMAN | ODF1 ODFP | 250 |
| QORL1_HUMAN | CRYZL1 4P11 | 349 |
| QOR_HUMAN | CRYZ | 329 |
| TITIN_HUMAN | TTN | 34350 |
| ZEB1_HUMAN | ZEB1 AREB6 TCF8 | 1124 |
| Q9UFA7_HUMAN | DKFZp434A0627 CRYGS hCG_16149 | 120 |
| B4DU04_HUMAN | AIM1 hCG_33516 | 542 |
| A8KAH6_HUMAN | HSPB2 hCG_39461 | 182 |
| Q6ICS9_HUMAN | HSPB3 hCG_1736006 | 150 |
| Q68DG0_HUMAN | DKFZp779D0968 HSPB7 | 174 |
| Q8N241_HUMAN | HSPB7 hCG_23506 | 245 |
| B4DLE8_HUMAN | CRYBG3 | 1365 |
| C3VMY8_HUMAN | CRYAB | 175 |
| R4UMM2_HUMAN | CRYBB2 | 205 |
| B3KQL3_HUMAN | 119 | |
| Q24JT5_HUMAN | CRYGA | 105 |
| V9HWB6_HUMAN | HEL55 | 160 |
| B4DNC2_HUMAN | 196 | |
| V9HW27_HUMAN | HEL-S-101 | 175 |
| H0YCW8_HUMAN | CRYAB | 106 |
| E9PHE4_HUMAN | CRYAA | 136 |
| E9PNH7_HUMAN | CRYAB | 106 |
| E7EWH7_HUMAN | CRYAA | 153 |
| B4DL87_HUMAN | 170 | |
| V9HW43_HUMAN | HEL-S-102 | 205 |
| E9PR44_HUMAN | CRYAB | 174 |
| Q8IVN0_HUMAN | 86 | |
| B7ZAH2_HUMAN | 542 | |
| C9J5A3_HUMAN | HSPB7 | 124 |
| E9PRS4_HUMAN | CRYAB | 69 |
| K7EP04_HUMAN | HSPB6 | 137 |
| I3L3Y1_HUMAN | CRYM | 97 |
| H0YG30_HUMAN | HSPB8 | 152 |
| H9KVC2_HUMAN | CRYM | 272 |
| E9PS12_HUMAN | CRYAB | 77 |
| E9PIR9_HUMAN | AIM1L | 787 |
| B4DUL6_HUMAN | 80 | |
| I3NI53_HUMAN | CRYM | 140 |
| Q9NTH7_HUMAN | DKFZp434L1713 | 264 |
| J3KQW1_HUMAN | AIM1L | 296 |
| Q96QW7_HUMAN | AIM1 | 316 |
| I3L2W5_HUMAN | CRYM | 165 |
| B1AHR5_HUMAN | CRYBB3 | 113 |
| B4DLI1_HUMAN | 403 | |
| I3L325_HUMAN | CRYM | 241 |
| Q7Z3C1_HUMAN | DKFZp686A14192 | 191 |
| B4DWM9_HUMAN | 154 | |
| Q71V83_HUMAN | CRYAA | 69 |
| Q6P5P8_HUMAN | AIM1 | 326 |
| C9JDH2_HUMAN | CRYBA2 | 129 |
| B4DIA6_HUMAN | 155 | |
| Q13684_HUMAN | 56 | |
| F8WE04_HUMAN | HSPB1 | 186 |
| J3QRT1_HUMAN | CRYBA1 | 75 |
| E9PRA8_HUMAN | CRYAB | 155 |
| E9PJL7_HUMAN | CRYAB | 130 |
| C9J5N2_HUMAN | CRYBG3 | 229 |
| I3L3J9_HUMAN | CRYM | 26 |
| C9J659_HUMAN | CRYBG3 | 131 |
| D3YTC6_HUMAN | HSPB7 | 165 |
References
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Further reading
[edit]- Graw J (1997). "The crystallins: Genes, proteins and diseases". Biological Chemistry. 378 (11): 1331–1348. doi:10.1515/bchm.1997.378.11.1299. PMID 9426193.
External links
[edit]- Crystallins at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
- alpha-Crystallins at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
- Lens Crystallin Crystal Structures[permanent dead link] by Christine Slingsby, Birkbeck College
- Crystallins: Molecule of the Month Archived 2015-10-25 at the Wayback Machine, by David Goodsell, RCSB Protein Data Bank